Gene: Cc00_g27280
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc00_g27280
- Transcript Identifier Cc00_g27280.1
- Gene Type Coding gene
- Location chr0 : 171471612-171477992 : positive
Gene Family Information
- ID HOM05D000131
- #Genes/#Species 2694/97
- Phylogenetic origin
- ID ORTHO05D000086
- #Genes/#Species 2333/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB Q93Z04
- UniProtKB I1NFF3
- UniProtKB Q9SCP2
- UniProtKB D7TM46
- UniProtKB E7BTN2
- UniProtKB Q944R1
- id GSCOCG00007367001
Descriptions
- Description Probable pectate lyase 12
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042547 | ISO | PLAZA Integrative Orthology | cell wall modification involved in multidimensional cell growth | AT3G54920 |
| GO:0098542 | ISO | PLAZA Integrative Orthology | defense response to other organism | AT3G54920 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030570 | IEA | InterPro | pectate lyase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031225 | ISO | PLAZA Integrative Orthology | anchored component of membrane | AT5G04310 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.3.5.2 | Cell wall organisation.pectin.modification and degradation.pectate lyase |