Gene: Cc00_g27260

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc00_g27260
  • Transcript Identifier Cc00_g27260.1
  • Gene Type Coding gene
  • Location chr0 : 171333908-171337332 : positive

Gene Family Information

  • ID HOM05D001174
  • #Genes/#Species 529/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB D7TB29
  • UniProtKB Q7X6Y7
  • UniProtKB B9RY52
  • UniProtKB B9H427
  • UniProtKB Q9FMS5
  • UniProtKB Q9C810
  • id GSCOCG00011971001

Descriptions

  • Description PHD finger protein At1g33420
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007060
ISO
PLAZA Integrative Orthologymale meiosis chromosome segregation AT1G66170
GO:0010032
ISO
PLAZA Integrative Orthologymeiotic chromosome condensation AT1G66170
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G66170
GO:0000212
ISO
PLAZA Integrative Orthologymeiotic spindle organization AT1G66170
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT1G66170
GO:0048235
ISO
PLAZA Integrative Orthologypollen sperm cell differentiation AT1G66170

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G66170
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G66170
GO:1990188
ISO
PLAZA Integrative Orthologyeuchromatin binding AT1G66170
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT1G66170
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G66170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G66170
GO:0000791
ISO
PLAZA Integrative Orthologyeuchromatin AT1G66170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR019787 Zinc finger, PHD-finger
IPR001965 Zinc finger, PHD-type
IPR011011 Zinc finger, FYVE/PHD-type
Mapman id Description
15.5.29 RNA biosynthesis.transcriptional regulation.transcription factor (PHD)