Gene: Cc00_g02950

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc00_g02950
  • Transcript Identifier Cc00_g02950.1
  • Gene Type Coding gene
  • Location chr0 : 21171179-21172553 : positive

Gene Family Information

  • ID HOM05D000395
  • #Genes/#Species 1259/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q8L3W1
  • UniProtKB B9RZH6
  • UniProtKB B9N4T5
  • UniProtKB Q2R9D2
  • UniProtKB Q2QMT6
  • UniProtKB G7J3B6
  • id GSCOCG00004318001

Descriptions

  • Description Putative B3 domain-containing transcription factor VRN1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G49480
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT3G18990
GO:0010048
ISO
PLAZA Integrative Orthologyvernalization response AT3G18990
GO:0034613
ISO
PLAZA Integrative Orthologycellular protein localization AT1G49480

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G18960
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G18990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G49480
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G49480
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT3G18990

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR003340 B3 DNA binding domain
Mapman id Description
15.5.5.2 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (REM)