Gene: Carub.0008s2679

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s2679
  • Transcript Identifier Carub.0008s2679.1
  • Gene Type Coding gene
  • Location scaffold_8 : 12729023-12731856 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s2679.v1.1
  • pacid 39250755
  • synonym Carubv10026114m.g

Descriptions

  • Description K13179 - ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13] (DDX18, HAS1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009790
ISO
PLAZA Integrative Orthologyembryo development AT5G65900
GO:0048866
ISO
PLAZA Integrative Orthologystem cell fate specification AT5G65900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003724
IEA
InterProRNA helicase activity
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT5G65900
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G65900

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G65900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044773 DDX18/Has1, DEAD-box helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR025313 Domain of unknown function DUF4217
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated