Gene: Carub.0008s2430
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s2430
- Transcript Identifier Carub.0008s2430.1
- Gene Type Coding gene
- Location scaffold_8 : 11798155-11800151 : positive
Gene Family Information
- ID HOM05D004105
- #Genes/#Species 172/96
- Phylogenetic origin
- ID ORTHO05D005649
- #Genes/#Species 154/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0008s2430.v1.1
- pacid 39250787
- synonym Carubv10026335m.g
Descriptions
- Description 5.4.3.8 - Glutamate-1-semialdehyde 2,1-aminomutase / Glutamate-1-semialdehyde aminotransferase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033014 | IEA | InterPro | tetrapyrrole biosynthetic process | |
| GO:0006779 | ISO | PLAZA Integrative Orthology | porphyrin-containing compound biosynthetic process | AT5G63570 |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT5G63570 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042286 | IEA | InterPro | glutamate-1-semialdehyde 2,1-aminomutase activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0008483 | IEA | InterPro | transaminase activity | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT5G63570 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G63570 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G63570 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT5G63570 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT5G63570 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G63570 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004639 | Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase |
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |
| IPR005814 | Aminotransferase class-III |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| Mapman id | Description |
|---|---|
| 7.12.1.4 | Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase |