Gene: AT5G63570
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G63570
- Transcript Identifier AT5G63570.1
- Gene Type Coding gene
- Location Chr5 : 25451957-25453620 : positive
Gene Family Information
- ID HOM05D004105
- #Genes/#Species 172/96
- Phylogenetic origin
- ID ORTHO05D005649
- #Genes/#Species 154/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G63570.1
- symbol GSA1
- full_name glutamate-1-semialdehyde-2%2C1-aminomutase
- uniprot P42799
Descriptions
- Description glutamate-1-semialdehyde-2,1-aminomutase
- Computational description glutamate-1-semialdehyde-2,1-aminomutase (GSA1); FUNCTIONS IN: glutamate-1-semialdehyde 2,1-aminomutase activity; INVOLVED IN: response to light stimulus, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase (InterPro:IPR004639), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate-1-semialdehyde 2,1-aminomutase 2 (TAIR:AT3G48730.1); Has 34880 Blast hits to 34874 proteins in 2819 species: Archae - 734; Bacteria - 23560; Metazoa - 547; Fungi - 812; Plants - 385; Viruses - 2; Other Eukaryotes - 8840 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006779 | IEA | GOA Database | porphyrin-containing compound biosynthetic process | |
GO:0006779 | IBA TAS | Gene Ontology | porphyrin-containing compound biosynthetic process | 1 2 |
GO:0033014 | IEA | GOA Database | tetrapyrrole biosynthetic process | |
GO:0033014 | IEA | InterPro | tetrapyrrole biosynthetic process | |
GO:0006782 | IEA | Gene Ontology | protoporphyrinogen IX biosynthetic process | |
GO:0015995 | IEA | Gene Ontology | chlorophyll biosynthetic process | |
GO:0009416 | IEP | Gene Ontology | response to light stimulus | 1 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0042286 | IGI IEA | Gene Ontology | glutamate-1-semialdehyde 2,1-aminomutase activity | 1 |
GO:0042286 | IEA | InterPro | glutamate-1-semialdehyde 2,1-aminomutase activity | |
GO:0016853 | IEA | GOA Database | isomerase activity | |
GO:0003824 | IEA | GOA Database | catalytic activity | |
GO:0003824 | IEA | InterPro | catalytic activity | |
GO:0008483 | IEA | Gene Ontology | transaminase activity | |
GO:0008483 | IEA | InterPro | transaminase activity | |
GO:0030170 | IDA IEA | Gene Ontology | pyridoxal phosphate binding | 3 |
GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
GO:0042803 | IDA | Gene Ontology | protein homodimerization activity | 3 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009507 | IDA IEA | GOA Database | chloroplast | |
GO:0009507 | HDA ISM, IBA | Gene Ontology | chloroplast | 2 4 |
GO:0009570 | IDA | GOA Database | chloroplast stroma | |
GO:0009570 | HDA | Gene Ontology | chloroplast stroma | 5 |
GO:0009941 | IDA | GOA Database | chloroplast envelope | |
GO:0009941 | HDA | Gene Ontology | chloroplast envelope | 6 |
GO:0048046 | IDA | GOA Database | apoplast | |
GO:0048046 | HDA | Gene Ontology | apoplast | 7 |
GO:0009536 | IEA | GOA Database | plastid | |
GO:0009536 | HDA | Gene Ontology | plastid | 8 |
GO:0005737 | ISM | Gene Ontology | cytoplasm | |
GO:0005829 | IDA | Gene Ontology | cytosol | 9 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |
IPR005814 | Aminotransferase class-III |
IPR004639 | Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase |
IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
IPR015424 | Pyridoxal phosphate-dependent transferase |
Mapman id | Description |
---|---|
7.12.1.4 | Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase |