Gene: Carub.0008s2160

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s2160
  • Transcript Identifier Carub.0008s2160.1
  • Gene Type Coding gene
  • Location scaffold_8 : 10762786-10766131 : negative

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s2160.v1.1
  • pacid 39251357
  • synonym Carubv10027017m.g

Descriptions

  • Description PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010077
ISO
PLAZA Integrative Orthologymaintenance of inflorescence meristem identity AT5G60910
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT5G60910
GO:0060560
ISO
PLAZA Integrative Orthologydevelopmental growth involved in morphogenesis AT5G60910
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT5G60910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding
GO:0046983
IEA
InterProprotein dimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G60910
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G60910
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT5G60910

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033896 MADS MEF2-like
IPR002487 Transcription factor, K-box
IPR002100 Transcription factor, MADS-box
IPR036879 Transcription factor, MADS-box superfamily
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)