Gene: Carub.0008s1980

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s1980
  • Transcript Identifier Carub.0008s1980.1
  • Gene Type Coding gene
  • Location scaffold_8 : 10088278-10089816 : negative

Gene Family Information

  • ID HOM05D000064
  • #Genes/#Species 3993/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s1980.v1.1
  • pacid 39251769
  • synonym Carubv10027110m.g

Descriptions

  • Description PTHR24073//PTHR24073:SF582 - FAMILY NOT NAMED // P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042546
ISO
PLAZA Integrative Orthologycell wall biogenesis AT5G59150

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT5G59150
GO:0009504
ISO
PLAZA Integrative Orthologycell plate AT5G59150
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G59150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001806 Small GTPase
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005225 Small GTP-binding protein domain
Mapman id Description
22.3.4.1.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.A-class RAB GTPase