Gene: Carub.0008s1805

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s1805
  • Transcript Identifier Carub.0008s1805.1
  • Gene Type Coding gene
  • Location scaffold_8 : 9475545-9476494 : negative

Gene Family Information

  • ID HOM05D000066
  • #Genes/#Species 3967/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s1805.v1.1
  • pacid 39251871
  • synonym Carubv10026914m.g

Descriptions

  • Description K14504 - xyloglucan:xyloglucosyl transferase TCH4 (TCH4)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010411
IEA
InterProxyloglucan metabolic process
GO:0042546
IEA
InterProcell wall biogenesis
GO:0006073
IEA
InterProcellular glucan metabolic process
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G57560
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT5G57560
GO:0009741
ISO
PLAZA Integrative Orthologyresponse to brassinosteroid AT5G57560
GO:0009664
ISO
PLAZA Integrative Orthologyplant-type cell wall organization AT5G57560
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G57560
GO:0009612
ISO
PLAZA Integrative Orthologyresponse to mechanical stimulus AT5G57560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016762
IEA
InterProxyloglucan:xyloglucosyl transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IEA
InterProcell wall
GO:0048046
IEA
InterProapoplast
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT5G57560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008264 Beta-glucanase
IPR016455 Xyloglucan endotransglucosylase/hydrolase
IPR000757 Glycoside hydrolase family 16
IPR044791 Beta-glucanase/XTH
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
Mapman id Description
50.2.4 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase