Gene: Carub.0008s1297

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0008s1297
Transcript Identifier Carub.0008s1297.1
Gene Type Coding gene
Location scaffold_8 : 7473258-7473830 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002465
#Genes/#Species 275/100
Phylogenetic origin

ID ORTHO05D008860
#Genes/#Species 113/85
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Carub.0008s1297.v1.1
pacid 39252925

Descriptions

Short descriptions
Ortholog descriptions

Description 1.5.1.25 - Thiomorpholine-carboxylate dehydrogenase / Ketimine reductase

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009627	ISO	PLAZA Integrative Orthology	systemic acquired resistance	AT5G52810
GO:1901672	ISO	PLAZA Integrative Orthology	positive regulation of systemic acquired resistance	AT5G52810
GO:0062034	ISO	PLAZA Integrative Orthology	L-pipecolic acid biosynthetic process	AT5G52810
GO:0042276	ISO	PLAZA Homology (enrichment)	error-prone translesion synthesis	HOM05D002465

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0062046	ISO	PLAZA Integrative Orthology	dehydropipecolic acid reductase	AT5G52810
GO:0003896	ISO	PLAZA Homology (enrichment)	DNA primase activity	HOM05D002465
GO:0003887	ISO	PLAZA Homology (enrichment)	DNA-directed DNA polymerase activity	HOM05D002465
GO:0008473	ISO	PLAZA Integrative Orthology	ornithine cyclodeaminase activity	AT5G52810

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT5G52810
GO:0009536	ISO	PLAZA Integrative Orthology	plastid	AT5G52810

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036291	NAD(P)-binding domain superfamily
IPR003462	Ornithine cyclodeaminase/mu-crystallin

Mapman id	Description
26.9.3.1.5.2	External stimuli response.pathogen.defense mechanisms.systemic acquired resistance (SAR).pipecolic acid metabolism.cyclodeaminase (SARD4)