Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 9.5e-104 380.2 191 100.0
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 9.2e-99 363.6 191 93.7
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 6.0e-98 360.9 191 94.2
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 1.2e-95 353.2 189 93.1
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 5.2e-94 347.8 189 91.0
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 3.4e-93 345.1 191 92.1
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 3.4e-93 345.1 189 90.5
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 3.2e-91 338.6 188 88.8
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 4.1e-91 338.2 188 88.8
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.7e-89 332.8 188 86.7
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.7e-89 332.8 188 86.7
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 1.5e-85 319.7 188 83.5
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 3.5e-82 308.5 189 79.9
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 1.7e-81 306.2 188 81.9
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 3.1e-70 268.9 184 70.1
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 9.0e-70 267.3 187 70.1
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 1.2e-69 266.9 184 71.2
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 1.5e-69 266.5 192 69.3
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 2.0e-69 266.2 189 70.4
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 5.8e-69 264.6 189 69.8
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 9.9e-69 263.8 187 67.9
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 9.9e-69 263.8 189 68.8
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.3e-68 263.5 186 71.0
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 2.2e-68 262.7 190 66.3
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 2.9e-68 262.3 189 68.8
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 3.8e-68 261.9 186 69.9
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 6.4e-68 261.2 188 70.2
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 8.4e-68 260.8 191 63.9
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.4e-67 260.0 189 66.7
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 1.4e-67 260.0 188 71.8
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 9.3e-67 257.3 187 64.7
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 9.3e-67 257.3 189 66.7
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 1.6e-66 256.5 189 68.8
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 2.1e-66 256.1 187 64.7
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 2.7e-66 255.8 187 64.2
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 2.7e-66 255.8 187 64.7
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 2.7e-66 255.8 187 64.7
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 6.0e-66 254.6 187 66.3
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 1.0e-65 253.8 189 66.1
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.0e-65 253.8 189 66.1
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.0e-65 253.8 189 66.1
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.3e-65 253.4 189 65.1
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.3e-65 253.4 186 70.4
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.3e-65 252.7 189 65.6
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 2.3e-65 252.7 189 64.6
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 3.0e-65 252.3 186 67.7
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.9e-65 251.9 189 65.6
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 3.9e-65 251.9 188 66.5
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 5.1e-65 251.5 187 66.8
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 8.7e-65 250.8 187 65.8
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 8.7e-65 250.8 187 67.4
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 3.3e-64 248.8 185 67.0
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 4.3e-64 248.4 189 64.6
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 5.6e-64 248.1 191 63.9
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 7.4e-64 247.7 181 68.5
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.3e-63 246.9 185 65.9
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 1.6e-63 246.5 187 69.0
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 3.6e-63 245.4 186 65.6
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 6.2e-63 244.6 186 65.6
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.4e-62 243.4 189 63.5
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 2.4e-62 242.7 188 63.8
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 2.4e-62 242.7 190 64.2
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 1.2e-61 240.4 187 62.0
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 1.2e-61 240.4 191 62.8
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 5.8e-61 238.0 186 62.4
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 2.2e-60 236.1 188 64.4
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 2.9e-60 235.7 189 61.9
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 8.4e-60 234.2 187 59.9
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 1.4e-59 233.4 187 61.5
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 2.4e-59 232.6 186 64.5
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 4.2e-59 231.9 187 59.9
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 4.2e-59 231.9 187 59.9
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 6.0e-58 228.0 187 61.5
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 6.0e-58 228.0 168 64.9
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.0e-57 227.3 189 58.7
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 3.9e-57 225.3 175 62.9
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 3.9e-57 225.3 185 58.4
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 1.5e-56 223.4 190 63.2
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 5.6e-56 221.5 188 56.9
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 5.6e-56 221.5 187 59.4
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 2.8e-55 219.2 185 58.4
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.4e-54 216.1 190 56.3
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 4.0e-54 215.3 186 60.2
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 6.9e-54 214.5 188 54.8
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 9.0e-54 214.2 162 65.4
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 9.0e-54 214.2 158 62.7
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 1.2e-53 213.8 185 59.5
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 1.2e-53 213.8 189 59.8
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 3.4e-53 212.2 154 63.6
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.0e-52 210.7 186 57.5
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 1.7e-52 209.9 194 59.3
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 5.5e-51 204.9 191 55.5
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 5.5e-51 204.9 191 55.5
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 7.1e-51 204.5 188 53.2
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 2.5e-48 196.1 187 53.5
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 4.8e-47 191.8 191 52.9
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 3.1e-46 189.1 192 53.1
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 3.4e-45 185.7 191 50.8
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 5.5e-43 178.3 190 45.8
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 2.9e-36 156.0 186 44.1
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 5.0e-36 155.2 109 67.9
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 3.2e-35 152.5 130 59.2
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 5.5e-35 151.8 109 67.0
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 1.1e-32 144.1 111 64.0
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.9e-28 129.4 86 73.3
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 7.9e-26 121.3 187 40.1
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 1.2e-21 107.5 123 46.3
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 6.7e-17 91.7 202 28.7
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 3.2e-11 72.8 66 60.6
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 8.8e-09 64.7 40 72.5


User provided reference genes

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