Gene: Carub.0008s1123
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s1123
- Transcript Identifier Carub.0008s1123.1
- Gene Type Coding gene
- Location scaffold_8 : 6787740-6788426 : negative
Gene Family Information
- ID HOM05D000124
- #Genes/#Species 2752/96
- Phylogenetic origin
- ID ORTHO05D000056
- #Genes/#Species 2677/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Carub.0008s1123.v1.1
- pacid 39251705
- synonym Carubv10027063m.g
Descriptions
- Description PF00847 - AP2 domain (AP2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT5G51190 |
| GO:0009873 | ISO | PLAZA Homology (enrichment) | ethylene-activated signaling pathway | HOM05D000124 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT5G51190 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G51190 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G51190 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.7.1 | RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF) |