Gene: Carub.0008s1092

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s1092
  • Transcript Identifier Carub.0008s1092.1
  • Gene Type Coding gene
  • Location scaffold_8 : 6665940-6667448 : negative

Gene Family Information

  • ID HOM05D000194
  • #Genes/#Species 2004/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s1092.v1.1
  • pacid 39252505
  • synonym Carubv10026852m.g

Descriptions

  • Description PTHR12565//PTHR12565:SF90 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BHLH137
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT5G50915
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc06g072520.2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G50915

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os08g0536800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024097 Basic helix-loop-helix leucine zipper transcription factor
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
26.1.2.1.2 External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.transcriptional regulator (CIB)