Gene: Carub.0008s0839
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s0839
- Transcript Identifier Carub.0008s0839.1
- Gene Type Coding gene
- Location scaffold_8 : 5536379-5537116 : negative
Gene Family Information
- ID HOM05D000307
- #Genes/#Species 1483/93
- Phylogenetic origin
- ID ORTHO05D000166
- #Genes/#Species 1551/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0008s0839.v1.1
- pacid 39253047
- synonym Carubv10028059m.g
Descriptions
- Description PTHR11945//PTHR11945:SF183 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045944 | ISO | PLAZA Homology (enrichment) | positive regulation of transcription by RNA polymerase II | HOM05D000307 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D000307 |
| GO:0000987 | ISO | PLAZA Homology (enrichment) | cis-regulatory region sequence-specific DNA binding | HOM05D000307 |
| GO:0046983 | ISO | PLAZA Homology (enrichment) | protein dimerization activity | HOM05D000307 |
| GO:0000981 | ISO | PLAZA Homology (enrichment) | DNA-binding transcription factor activity, RNA polymerase II-specific | HOM05D000307 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |