Gene: Carub.0008s0827

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s0827
  • Transcript Identifier Carub.0008s0827.1
  • Gene Type Coding gene
  • Location scaffold_8 : 5476858-5479783 : positive

Gene Family Information

  • ID HOM05D000011
  • #Genes/#Species 8379/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s0827.v1.1
  • pacid 39252745
  • synonym Carubv10025854m.g

Descriptions

  • Description PTHR23155//PTHR23155:SF549 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006952
IEA
InterProdefense response
GO:0051707
ISO
PLAZA Integrative Orthologyresponse to other organism AT5G43470
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT5G43470
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT5G43470
GO:0002230
ISO
PLAZA Integrative Orthologypositive regulation of defense response to virus by host AT5G43470
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT5G43470
GO:0009626
ISO
PLAZA Integrative Orthologyplant-type hypersensitive response AT5G43470
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT5G43470
GO:0009646
ISO
PLAZA Integrative Orthologyresponse to absence of light AT5G43470
GO:0002239
ISO
PLAZA Integrative Orthologyresponse to oomycetes AT5G43470
GO:0071446
ISO
PLAZA Integrative Orthologycellular response to salicylic acid stimulus AT5G43470
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT5G43470

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043531
IEA
InterProADP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G43470

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G43470

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041118 Rx, N-terminal
IPR044974 Disease resistance protein, plants
IPR032675 Leucine-rich repeat domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR038005 Virus X resistance protein-like, coiled-coil domain
IPR002182 NB-ARC
IPR042197 Apoptotic protease-activating factors, helical domain
Mapman id Description
35.1 not assigned.annotated