Gene: Carub.0008s0601
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s0601
- Transcript Identifier Carub.0008s0601.1
- Gene Type Coding gene
- Location scaffold_8 : 2758475-2759704 : positive
Gene Family Information
- ID HOM05D003792
- #Genes/#Species 182/85
- Phylogenetic origin
- ID ORTHO05D003195
- #Genes/#Species 238/87
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0008s0601.v1.1
- pacid 39250306
- synonym Carubv10027042m.g
Descriptions
- Description PTHR33676//PTHR33676:SF3 - FAMILY NOT NAMED // COLD REGULATED PROTEIN 27
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | IEA | InterPro | response to cold | |
| GO:0042752 | IEA | InterPro | regulation of circadian rhythm | |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT5G42900 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT5G42900 |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT5G42900 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT5G42900 |
| GO:0009615 | ISO | PLAZA Integrative Orthology | response to virus | AT5G42900 |
| GO:0009637 | ISO | PLAZA Integrative Orthology | response to blue light | AT5G42900 |
| GO:2000028 | ISO | PLAZA Integrative Orthology | regulation of photoperiodism, flowering | AT5G42900 |
| GO:0009646 | ISO | PLAZA Integrative Orthology | response to absence of light | AT5G42900 |
| GO:0010114 | ISO | PLAZA Integrative Orthology | response to red light | AT5G42900 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G42900 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G42900 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044678 | Cold-regulated protein 27/28 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |