Gene: Carub.0008s0499

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s0499
  • Transcript Identifier Carub.0008s0499.1
  • Gene Type Coding gene
  • Location scaffold_8 : 2184939-2186171 : positive

Gene Family Information

  • ID HOM05D007216
  • #Genes/#Species 109/71
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s0499.v1.1
  • pacid 39253114
  • synonym Carubv10027730m.g

Descriptions

  • Description PTHR23042:SF65 - TRANSCRIPTION FACTOR BHLH92
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G43650
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Os03g0741100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G43650
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G43650

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os03g0741100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR044658 Transcription factor bHLH92/bHLH041-like
Mapman id Description
35.1 not assigned.annotated