Gene: Carub.0008s0306
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s0306
- Transcript Identifier Carub.0008s0306.1
- Gene Type Coding gene
- Location scaffold_8 : 1243300-1245060 : negative
Gene Family Information
- ID HOM05D000064
- #Genes/#Species 3993/100
- Phylogenetic origin
- ID ORTHO05D001480
- #Genes/#Species 400/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0008s0306.v1.1
- pacid 39252480
- synonym Carubv10027159m.g
Descriptions
- Description K07889 - Ras-related protein Rab-5C (RAB5C)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007034 | ISO | PLAZA Integrative Orthology | vacuolar transport | AT5G45130 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G45130 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT5G45130 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT5G45130 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.4.1.6 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.F-class RAB GTPase |
| 22.3.4.5.1 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB5-RAB7-dependent pathway.small GTPase (RAB5) |