Gene: Carub.0008s0109

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s0109
  • Transcript Identifier Carub.0008s0109.1
  • Gene Type Coding gene
  • Location scaffold_8 : 406457-407881 : negative

Gene Family Information

  • ID HOM05D000567
  • #Genes/#Species 974/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s0109.v1.1
  • pacid 39251490
  • synonym Carubv10028430m.g

Descriptions

  • Description K13422 - transcription factor MYC2 (MYC2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0042538
ISO
PLAZA Integrative Orthologyhyperosmotic salinity response AT5G46830
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G46830
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated Solyc08g076930.1
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis Solyc08g005050.4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT5G46830
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Solyc08g076930.1
GO:0005509
ISO
PLAZA Integrative Orthologycalcium ion binding AT5G46830
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Solyc08g076930.1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G46830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR045084 Transcription factor AIB/MYC-like
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR025610 Transcription factor MYC/MYB N-terminal
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)