Gene: Carub.0007s3596

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0007s3596
  • Transcript Identifier Carub.0007s3596.1
  • Gene Type Coding gene
  • Location scaffold_7 : 16429068-16431091 : positive

Gene Family Information

  • ID HOM05D006597
  • #Genes/#Species 121/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0007s3596.v1.1
  • pacid 39232016
  • synonym Carubv10005433m.g

Descriptions

  • Description PTHR10343//PTHR10343:SF61 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT // STARCH BINDING SCAFFOLD PROTEIN-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010581
ISO
PLAZA Integrative Orthologyregulation of starch biosynthetic process AT5G39790
GO:0019252
ISO
PLAZA Integrative Orthologystarch biosynthetic process AT5G39790

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G39790
GO:2001070
ISO
PLAZA Integrative Orthologystarch binding AT5G39790
GO:0030247
ISO
PLAZA Integrative Orthologypolysaccharide binding AT5G39790

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G39790
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G39790
GO:0009569
ISO
PLAZA Integrative Orthologychloroplast starch grain AT5G39790

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032640 AMP-activated protein kinase, glycogen-binding domain
IPR013783 Immunoglobulin-like fold
IPR014756 Immunoglobulin E-set
Mapman id Description
3.2.2.4.7 Carbohydrate metabolism.starch metabolism.biosynthesis.starch synthase activities.amylose biosynthesis regulatory scaffold protein