Gene: Carub.0007s3555
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0007s3555
- Transcript Identifier Carub.0007s3555.1
- Gene Type Coding gene
- Location scaffold_7 : 16231735-16235171 : negative
Gene Family Information
- ID HOM05D000005
- #Genes/#Species 11550/84
- Phylogenetic origin
- ID ORTHO05D010246
- #Genes/#Species 71/11
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0007s3555.v1.1
- pacid 39233604
- synonym Carubv10004053m.g
Descriptions
- Description PTHR11017//PTHR11017:SF169 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // DISEASE RESISTANCE PROTEIN-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006952 | IEA | InterPro | defense response | |
| GO:0007165 | IEA | InterPro | signal transduction | |
| GO:0045088 | ISO | PLAZA Integrative Orthology | regulation of innate immune response | AT1G17600 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043531 | IEA | InterPro | ADP binding | |
| GO:0003953 | IEA | InterPro | NAD+ nucleosidase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G17600 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G17600 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G17600 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G48770 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR044974 | Disease resistance protein, plants |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR002182 | NB-ARC |
| IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain |
| IPR032675 | Leucine-rich repeat domain superfamily |
| IPR042197 | Apoptotic protease-activating factors, helical domain |
| IPR035897 | Toll/interleukin-1 receptor homology (TIR) domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR011713 | Leucine-rich repeat 3 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |