Gene: Carub.0007s1736

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0007s1736
  • Transcript Identifier Carub.0007s1736.1
  • Gene Type Coding gene
  • Location scaffold_7 : 6476225-6477271 : negative

Gene Family Information

  • ID HOM05D000497
  • #Genes/#Species 1068/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0007s1736.v1.1
  • pacid 39233780
  • synonym Carubv10005160m.g

Descriptions

  • Description PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G23750
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway Solyc06g082590.1
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene Solyc06g082590.1
GO:0048825
ISO
PLAZA Integrative Orthologycotyledon development AT4G23750
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc06g082590.1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT4G23750
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G23750
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G23750

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G23750

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)