Gene: Carub.0007s1034

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0007s1034
  • Transcript Identifier Carub.0007s1034.1
  • Gene Type Coding gene
  • Location scaffold_7 : 3926843-3927857 : positive

Gene Family Information

  • ID HOM05D000066
  • #Genes/#Species 3967/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0007s1034.v1.1
  • pacid 39233508
  • synonym Carubv10005183m.g

Descriptions

  • Description PTHR31062//PTHR31062:SF20 - FAMILY NOT NAMED // XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 14-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT4G30270
GO:0071669
ISO
PLAZA Integrative Orthologyplant-type cell wall organization or biogenesis AT4G30270
GO:0007568
ISO
PLAZA Integrative Orthologyaging AT4G30270
GO:0009740
ISO
PLAZA Integrative Orthologygibberellic acid mediated signaling pathway AT4G30270
GO:0009741
ISO
PLAZA Integrative Orthologyresponse to brassinosteroid AT4G30270
GO:0010411
IEA
InterProxyloglucan metabolic process
GO:0009828
ISO
PLAZA Integrative Orthologyplant-type cell wall loosening AT4G30270
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006073
IEA
InterProcellular glucan metabolic process
GO:0042546
IEA
InterProcell wall biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016762
IEA
InterProxyloglucan:xyloglucosyl transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G30270
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT4G30270
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT4G30270
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G30270
GO:0048046
IEA
InterProapoplast
GO:0005618
IEA
InterProcell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016455 Xyloglucan endotransglucosylase/hydrolase
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
IPR000757 Glycoside hydrolase family 16
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 Beta-glucanase/XTH
Mapman id Description
50.2.4 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase