Gene: Carub.0007s0578

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0007s0578
Transcript Identifier Carub.0007s0578.1
Gene Type Coding gene
Location scaffold_7 : 2168551-2170068 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000145
#Genes/#Species 2562/98
Phylogenetic origin

ID ORTHO05D000115
#Genes/#Species 1961/98
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

id Carub.0007s0578.v1.1
pacid 39235440
synonym Carubv10007752m.g

Descriptions

Short descriptions
Ortholog descriptions

Description 2.3.1.119//2.3.1.199 - Transferred entry: 1.1.1.330, 1.3.1.93, 2.3.1.199 and 4.2.1.134 // Very-long-chain 3-oxoacyl-CoA synthase / Very-long-chain beta-ketoacyl-CoA synthase

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006633	IEA	InterPro	fatty acid biosynthetic process
GO:0030497	ISO	PLAZA Integrative Orthology	fatty acid elongation	AT4G34520
GO:0000038	ISO	PLAZA Integrative Orthology	very long-chain fatty acid metabolic process	AT4G34520

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016747	IEA	InterPro	acyltransferase activity, transferring groups other than amino-acyl groups
GO:0016746	IEA	InterPro	acyltransferase activity
GO:0009922	ISO	PLAZA Integrative Orthology	fatty acid elongase activity	AT4G34520

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016020	IEA	InterPro	membrane

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR012392	Very-long-chain 3-ketoacyl-CoA synthase
IPR016039	Thiolase-like
IPR013747	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal
IPR013601	FAE1/Type III polyketide synthase-like protein

Mapman id	Description
5.1.6.1.4.1	Lipid metabolism.fatty acid biosynthesis.endoplasmic reticulum-localized fatty acid elongase (FAE) system.fatty acid elongation complex.condensing enzyme activities.3-ketoacyl-CoA synthase (KCS)