Gene: Carub.0007s0384

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0007s0384
  • Transcript Identifier Carub.0007s0384.1
  • Gene Type Coding gene
  • Location scaffold_7 : 1415328-1417830 : positive

Gene Family Information

  • ID HOM05D003051
  • #Genes/#Species 225/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0007s0384.v1.1
  • pacid 39233711
  • synonym Carubv10004706m.g

Descriptions

  • Description PTHR13693//PTHR13693:SF2 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // SERINE PALMITOYLTRANSFERASE 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009058
IEA
InterProbiosynthetic process
GO:0009825
ISO
PLAZA Integrative Orthologymultidimensional cell growth AT4G36480
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G36480
GO:0043067
ISO
PLAZA Integrative Orthologyregulation of programmed cell death AT4G36480
GO:0030148
ISO
PLAZA Integrative Orthologysphingolipid biosynthetic process AT4G36480

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G36480
GO:0004758
ISO
PLAZA Integrative Orthologyserine C-palmitoyltransferase activity AT4G36480

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G36480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR004839 Aminotransferase, class I/classII
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
IPR015424 Pyridoxal phosphate-dependent transferase
Mapman id Description
5.4.1.1 Lipid metabolism.sphingolipid biosynthesis.serine C-palmitoyltransferase complex.catalytic subunit LCB1