Gene: Carub.0006s2460
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0006s2460
- Transcript Identifier Carub.0006s2460.1
- Gene Type Coding gene
- Location scaffold_6 : 9418289-9420172 : negative
Gene Family Information
- ID HOM05D002869
- #Genes/#Species 242/99
- Phylogenetic origin
- ID ORTHO05D003080
- #Genes/#Species 245/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0006s2460.v1.1
- pacid 39249654
- synonym Carubv10001473m.g
Descriptions
- Description K08489 - syntaxin 16 (STX16)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0061025 | ISO | PLAZA Integrative Orthology | membrane fusion | AT5G26980 |
| GO:0006886 | ISO | PLAZA Integrative Orthology | intracellular protein transport | AT5G26980 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G26980 |
| GO:0005484 | ISO | PLAZA Integrative Orthology | SNAP receptor activity | AT5G26980 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT5G26980 |
| GO:0030140 | ISO | PLAZA Integrative Orthology | trans-Golgi network transport vesicle | AT5G26980 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.5.1.1.4 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP4-group component |