Gene: AT5G26980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G26980
  • Transcript Identifier AT5G26980.1
  • Gene Type Coding gene
  • Location Chr5 : 9488724-9490604 : negative

Gene Family Information

  • ID HOM05D002869
  • #Genes/#Species 242/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G26980.1
  • symbol SYP41
  • Alias ATSYP41,ATTLG2A
  • uniprot O65359

Descriptions

  • Description syntaxin of plants 41
  • Computational description syntaxin of plants 41 (SYP41); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 43 (TAIR:AT3G05710.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IBA
TAS
Gene Ontologyintracellular protein transport1 2
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0048278
IBA
Gene Ontologyvesicle docking2
GO:0006906
IBA
Gene Ontologyvesicle fusion2
GO:0061025
TAS
Gene Ontologymembrane fusion1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005484
IEA
GOA DatabaseSNAP receptor activity
GO:0005484
IBA
TAS
Gene OntologySNAP receptor activity1 2
GO:0000149
IBA
Gene OntologySNARE binding2
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IBA
Gene Ontologyintegral component of membrane2
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
ISM
Gene OntologyGolgi apparatus
GO:0012505
IBA
Gene Ontologyendomembrane system2
GO:0031201
IBA
Gene OntologySNARE complex2
GO:0030140
TAS
Gene Ontologytrans-Golgi network transport vesicle1
GO:0005802
IDA
TAS
Gene Ontologytrans-Golgi network1 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000727 Target SNARE coiled-coil homology domain
IPR010989 SNARE
IPR006011 Syntaxin, N-terminal domain
Mapman id Description
22.3.5.1.1.4 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP4-group component