Gene: Carub.0006s2301

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s2301
  • Transcript Identifier Carub.0006s2301.1
  • Gene Type Coding gene
  • Location scaffold_6 : 8737252-8737949 : negative

Gene Family Information

  • ID HOM05D000841
  • #Genes/#Species 709/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s2301.v1.1
  • pacid 39248784
  • synonym Carubv10001796m.g

Descriptions

  • Description PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway Solyc06g065820.3
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT5G25190
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene Solyc06g065820.3
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc06g065820.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G25190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT5G25190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
IPR001471 AP2/ERF domain
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)