Gene: Carub.0006s1238

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s1238
  • Transcript Identifier Carub.0006s1238.1
  • Gene Type Coding gene
  • Location scaffold_6 : 4601193-4602953 : negative

Gene Family Information

  • ID HOM05D002662
  • #Genes/#Species 258/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s1238.v1.1
  • pacid 39247730
  • synonym Carubv10000669m.g

Descriptions

  • Description K11650 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D (SMARCD)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G14170
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT5G14170
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT5G14170
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT5G14170
GO:2000024
ISO
PLAZA Integrative Orthologyregulation of leaf development AT5G14170
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G14170

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G14170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G14170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003121 SWIB/MDM2 domain
IPR036885 SWIB/MDM2 domain superfamily
IPR019835 SWIB domain
Mapman id Description
12.4.1.1.3 Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.core modules.component SWP73