Gene: Carub.0006s0897

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s0897
  • Transcript Identifier Carub.0006s0897.1
  • Gene Type Coding gene
  • Location scaffold_6 : 3245065-3248614 : negative

Gene Family Information

  • ID HOM05D002409
  • #Genes/#Species 281/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s0897.v1.1
  • pacid 39246191
  • synonym Carubv10003006m.g

Descriptions

  • Description PTHR30566//PTHR30566:SF13 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL // MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
InterProtransmembrane transport
GO:0010020
ISO
PLAZA Integrative Orthologychloroplast fission AT5G10490
GO:0009657
ISO
PLAZA Integrative Orthologyplastid organization AT5G10490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005216
ISO
PLAZA Integrative Orthologyion channel activity AT5G10490

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G10490
GO:0009526
ISO
PLAZA Integrative Orthologyplastid envelope AT5G10490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006685 Mechanosensitive ion channel MscS
IPR023408 Mechanosensitive ion channel MscS domain superfamily
IPR045042 Mechanosensitive ion channel protein YnaI-like
IPR010920 LSM domain superfamily
Mapman id Description
24.3.5 Solute transport.channels.mechanosensitive ion channel (MSL)