Gene: Carub.0004s1578
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0004s1578
- Transcript Identifier Carub.0004s1578.1
- Gene Type Coding gene
- Location scaffold_4 : 9338074-9341794 : negative
Gene Family Information
- ID HOM05D001720
- #Genes/#Species 376/94
- Phylogenetic origin
- ID ORTHO05D001813
- #Genes/#Species 351/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0004s1578.v1.1
- pacid 39236125
- synonym Carubv10022696m.g
Descriptions
- Description PTHR12902 - WASP-1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0030036 | IEA | InterPro | actin cytoskeleton organization | |
GO:0051127 | ISO | PLAZA Integrative Orthology | positive regulation of actin nucleation | AT2G34150 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G34150 |
GO:0003785 | ISO | PLAZA Integrative Orthology | actin monomer binding | AT2G34150 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005856 | IEA | InterPro | cytoskeleton | |
GO:0043229 | ISO | PLAZA Integrative Orthology | intracellular organelle | AT2G34150 |
GO:0031209 | ISO | PLAZA Integrative Orthology | SCAR complex | AT2G34150 |
GO:0016020 | ISO | PLAZA Integrative Orthology | membrane | AT2G34150 |
GO:0071944 | ISO | PLAZA Integrative Orthology | cell periphery | AT2G34150 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR028288 | SCAR/WAVE family |
Mapman id | Description |
---|---|
20.2.2.2.4 | Cytoskeleton organisation.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.component SCAR |