Gene: Carub.0003s3312

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0003s3312
Transcript Identifier Carub.0003s3312.1
Gene Type Coding gene
Location scaffold_3 : 14027781-14031551 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000809
#Genes/#Species 730/100
Phylogenetic origin

ID ORTHO05D001196
#Genes/#Species 459/95
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

id Carub.0003s3312.v1.1
pacid 39239320
synonym Carubv10015589m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR21736:SF13 - PROTEIN VERNALIZATION INSENSITIVE 3-RELATED

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010048	IEA	InterPro	vernalization response
GO:0040029	IEA	InterPro	regulation of gene expression, epigenetic
GO:0009409	ISO	PLAZA Integrative Orthology	response to cold	AT2G18880
GO:0070417	ISO	PLAZA Integrative Orthology	cellular response to cold	AT2G18880

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR013783	Immunoglobulin-like fold
IPR003961	Fibronectin type III
IPR036116	Fibronectin type III superfamily
IPR032881	Oberon, PHD finger domain
IPR044514	Vernalization insensitive 3-like

Mapman id	Description
12.3.3.2.1.2.2	Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.PRC2-VRN-interacting factor (VIN3/VEL)