Gene: Carub.0003s3186
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0003s3186
- Transcript Identifier Carub.0003s3186.1
- Gene Type Coding gene
- Location scaffold_3 : 13492285-13493588 : positive
Gene Family Information
- ID HOM05D001172
- #Genes/#Species 529/93
- Phylogenetic origin
- ID ORTHO05D001128
- #Genes/#Species 479/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0003s3186.v1.1
- pacid 39240164
- synonym Carubv10014482m.g
Descriptions
- Description PF13441 - YMGG-like Gly-zipper (Gly-zipper_YMGG)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009299 | ISO | PLAZA Integrative Orthology | mRNA transcription | AT2G17730 |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT2G17730 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G17730 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031351 | ISO | PLAZA Integrative Orthology | integral component of plastid membrane | AT2G17730 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT2G17730 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.3.3.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase |