Gene: Carub.0003s3105

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s3105
  • Transcript Identifier Carub.0003s3105.1
  • Gene Type Coding gene
  • Location scaffold_3 : 13197619-13199003 : positive

Gene Family Information

  • ID HOM05D001808
  • #Genes/#Species 362/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s3105.v1.1
  • pacid 39242054
  • synonym Carubv10014079m.g

Descriptions

  • Description PTHR33734:SF5 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008061
ISO
PLAZA Integrative Orthologychitin binding AT2G17120
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os03g0133400
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association Os03g0133400

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G17120
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G17120
GO:0031225
ISO
PLAZA Integrative Orthologyanchored component of membrane AT2G17120
GO:0046658
ISO
PLAZA Integrative Orthologyanchored component of plasma membrane AT2G17120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018392 LysM domain
IPR036779 LysM domain superfamily
Mapman id Description
26.9.1.2.2 External stimuli response.pathogen.pattern-triggered immunity (PTI) network.fungal elicitor response.chitin receptor protein kinase (CEBiP)