Gene: Carub.0003s1716
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0003s1716
- Transcript Identifier Carub.0003s1716.1
- Gene Type Coding gene
- Location scaffold_3 : 6078669-6080899 : negative
Gene Family Information
- ID HOM05D001747
- #Genes/#Species 371/100
- Phylogenetic origin
- ID ORTHO05D001696
- #Genes/#Species 369/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0003s1716.v1.1
- pacid 39240325
- synonym Carubv10014402m.g
Descriptions
- Description K08494 - novel plant SNARE (NSPN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006890 | ISO | PLAZA Homology (enrichment) | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | HOM05D001747 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005484 | IEA | InterPro | SNAP receptor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031201 | IEA | InterPro | SNARE complex | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G17440 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.5.1.2.4 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qb-type SNARE components.NPSN-group component |