Gene: AT3G16450
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G16450
- Transcript Identifier AT3G16450.2
- Gene Type Coding gene
- Location Chr3 : 5588593-5589792 : positive
Gene Family Information
- ID HOM05D000956
- #Genes/#Species 627/88
- Phylogenetic origin
- ID ORTHO05D001930
- #Genes/#Species 336/12
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G16450.2
- symbol JAL33
- full_name Jacalin-related lectin 33
- uniprot O04311
Descriptions
- Description Mannose-binding lectin superfamily protein
- Computational description Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to zinc ion, response to cold; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, seedling growth; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: myrosinase-binding protein-like protein-300B (TAIR:AT3G16440.1); Has 1665 Blast hits to 784 proteins in 42 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010043 | IEP | Gene Ontology | response to zinc ion | 1 |
| GO:0009409 | IEP | GOA Database | response to cold |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030246 | IEA | GOA Database | carbohydrate binding | |
| GO:0030246 | IEA | InterPro | carbohydrate binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0005634 | IDA | GOA Database | nucleus | |
| GO:0005634 | HDA | Gene Ontology | nucleus | 2 |
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |