Gene: Carub.0003s1604

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s1604
  • Transcript Identifier Carub.0003s1604.1
  • Gene Type Coding gene
  • Location scaffold_3 : 5653282-5656419 : negative

Gene Family Information

  • ID HOM05D000181
  • #Genes/#Species 2101/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s1604.v1.1
  • pacid 39241151
  • synonym Carubv10013182m.g

Descriptions

  • Description PTHR23076:SF56 - AAA-TYPE ATPASE FAMILY PROTEIN
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
InterProproteolysis
GO:0045037
ISO
PLAZA Integrative Orthologyprotein import into chloroplast stroma AT3G16290

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004176
IEA
InterProATP-dependent peptidase activity
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G16290
GO:0016464
ISO
PLAZA Integrative Orthologychloroplast protein-transporting ATPase activity AT3G16290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G16290
GO:0016020
ISO
PLAZA Homology (enrichment)membrane HOM05D000181
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G16290
GO:0062091
ISO
PLAZA Integrative OrthologyYcf2/FtsHi complex AT3G16290

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037219 Peptidase M41-like
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR041569 AAA ATPase, AAA+ lid domain
IPR003959 ATPase, AAA-type, core
IPR000642 Peptidase M41
IPR003593 AAA+ ATPase domain
Mapman id Description
35.1 not assigned.annotated