Gene: AT3G16290

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G16290
  • Transcript Identifier AT3G16290.1
  • Gene Type Coding gene
  • Location Chr3 : 5521187-5524995 : negative

Gene Family Information

  • ID HOM05D000181
  • #Genes/#Species 2101/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G16290.1
  • symbol EMB2083
  • full_name embryo defective 2083
  • uniprot A8MPR5

Descriptions

  • Description AAA-type ATPase family protein
  • Computational description embryo defective 2083 (EMB2083); FUNCTIONS IN: in 8 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 40436 Blast hits to 36159 proteins in 3226 species: Archae - 1511; Bacteria - 13353; Metazoa - 6817; Fungi - 4228; Plants - 3474; Viruses - 31; Other Eukaryotes - 11022 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IBA
Gene Ontologyproteolysis1
GO:0006508
IEA
InterProproteolysis
GO:0045037
IDA
Gene Ontologyprotein import into chloroplast stroma2
GO:0009793
NAS
Gene Ontologyembryo development ending in seed dormancy

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004222
IEA
Gene Ontologymetalloendopeptidase activity
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0004176
IEA
GOA DatabaseATP-dependent peptidase activity
GO:0004176
IBA
Gene OntologyATP-dependent peptidase activity1
GO:0004176
IEA
InterProATP-dependent peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016464
IDA
Gene Ontologychloroplast protein-transporting ATPase activity2
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast3
GO:0031969
IEA
GOA Databasechloroplast membrane
GO:0009534
IBA
Gene Ontologychloroplast thylakoid1
GO:0062091
IDA
Gene OntologyYcf2/FtsHi complex2
GO:0009941
IDA, HDA
Gene Ontologychloroplast envelope2 4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000642 Peptidase M41
IPR037219 Peptidase M41-like
IPR003593 AAA+ ATPase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
IPR041569 AAA ATPase, AAA+ lid domain
Mapman id Description
23.1.3.4.1.2 Protein translocation.chloroplast.inner envelope TIC translocation system.AAA-ATPase motor complex.FtsH12-FtsHi subcomplex.component FtsHi