Gene: Carub.0003s1533

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s1533
  • Transcript Identifier Carub.0003s1533.1
  • Gene Type Coding gene
  • Location scaffold_3 : 5412112-5414228 : negative

Gene Family Information

  • ID HOM05D002649
  • #Genes/#Species 259/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s1533.v1.1
  • pacid 39240779
  • synonym Carubv10016199m.g

Descriptions

  • Description PF01535 - PPR repeat (PPR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G15590

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G15590

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
16.11.3.3.4.20 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (POCO)