Gene: Carub.0003s1392

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s1392
  • Transcript Identifier Carub.0003s1392.1
  • Gene Type Coding gene
  • Location scaffold_3 : 4857570-4859394 : negative

Gene Family Information

  • ID HOM05D000245
  • #Genes/#Species 1725/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s1392.v1.1
  • pacid 39239629
  • synonym Carubv10013925m.g

Descriptions

  • Description PTHR31190//PTHR31190:SF27 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009873
IEA
InterProethylene-activated signaling pathway
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0001666
ISO
PLAZA Integrative Orthologyresponse to hypoxia AT3G14230
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT3G14230

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G14230
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G14230

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G14230

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044808 Ethylene-responsive transcription factor
IPR016177 DNA-binding domain superfamily
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)