Gene: Carub.0003s1149

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0003s1149
Transcript Identifier Carub.0003s1149.1
Gene Type Coding gene
Location scaffold_3 : 3961936-3963916 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001227
#Genes/#Species 506/98
Phylogenetic origin

ID ORTHO05D001082
#Genes/#Species 495/98
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Carub.0003s1149.v1.1
pacid 39240599
synonym Carubv10014171m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR33432//PTHR33432:SF6 - FAMILY NOT NAMED // EMSY N TERMINUS AND PLANT TUDOR-LIKE DOMAIN-CONTAINING PROTEIN

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0050832	IEA	InterPro	defense response to fungus
GO:0010228	ISO	PLAZA Integrative Orthology	vegetative to reproductive phase transition of meristem	AT3G12140

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G12140
GO:0031493	ISO	PLAZA Integrative Orthology	nucleosomal histone binding	AT3G12140
GO:0003682	ISO	PLAZA Integrative Orthology	chromatin binding	AT3G12140

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G12140

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR014002	Agenet domain, plant type
IPR005491	ENT domain
IPR033485	Protein EMSY-LIKE, plant
IPR036142	ENT domain-like superfamily

Mapman id	Description
12.3.3.9.2	Chromatin organisation.post-translational histone modification.histone lysine methylation.histone methylation reader activities.histone H3K36 methylation reader (EML)