Gene: Carub.0003s1076

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s1076
  • Transcript Identifier Carub.0003s1076.1
  • Gene Type Coding gene
  • Location scaffold_3 : 3691188-3693052 : positive

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s1076.v1.1
  • pacid 39240402
  • synonym Carubv10013393m.g

Descriptions

  • Description PTHR10641//PTHR10641:SF540 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB TRANSCRIPTION FACTOR
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045926
ISO
PLAZA Integrative Orthologynegative regulation of growth AT3G11440
GO:0048235
ISO
PLAZA Integrative Orthologypollen sperm cell differentiation AT3G11440
GO:0048653
ISO
PLAZA Integrative Orthologyanther development AT3G11440
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT3G11440
GO:0008285
ISO
PLAZA Integrative Orthologynegative regulation of cell population proliferation AT3G11440
GO:1990019
ISO
PLAZA Integrative Orthologyprotein storage vacuole organization AT3G11440
GO:0043068
ISO
PLAZA Integrative Orthologypositive regulation of programmed cell death AT3G11440
GO:0009740
ISO
PLAZA Integrative Orthologygibberellic acid mediated signaling pathway AT3G11440
GO:0048655
ISO
PLAZA Integrative Orthologyanther wall tapetum morphogenesis AT3G11440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT3G11440
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G11440

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G11440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
IPR016310 Transcription factor GAMYB-like
IPR017930 Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)