Gene: Carub.0003s1014
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0003s1014
- Transcript Identifier Carub.0003s1014.1
- Gene Type Coding gene
- Location scaffold_3 : 3471064-3472982 : negative
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D000424
- #Genes/#Species 950/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0003s1014.v1.1
- pacid 39242158
- synonym Carubv10016461m.g
Descriptions
- Description PTHR31451:SF8 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 3-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071704 | IEA | InterPro | organic substance metabolic process | |
| GO:0071585 | ISO | PLAZA Integrative Orthology | detoxification of cadmium ion | AT3G10890 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT3G10890 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000001 |
| GO:0016985 | ISO | PLAZA Integrative Orthology | mannan endo-1,4-beta-mannosidase activity | AT3G10890 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT3G10890 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.3.2.2 | Cell wall organisation.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase |