Gene: Carub.0003s0829
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0003s0829
- Transcript Identifier Carub.0003s0829.1
- Gene Type Coding gene
- Location scaffold_3 : 2855197-2857207 : positive
Gene Family Information
- ID HOM05D005815
- #Genes/#Species 134/90
- Phylogenetic origin
- ID ORTHO05D007023
- #Genes/#Species 135/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0003s0829.v1.1
- pacid 39240959
- synonym Carubv10014160m.g
Descriptions
- Description 1.3.7.4 - Phytochromobilin:ferredoxin oxidoreductase / Phytochromobilin synthase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010024 | IEA | InterPro | phytochromobilin biosynthetic process | |
| GO:0010019 | ISO | PLAZA Integrative Orthology | chloroplast-nucleus signaling pathway | AT3G09150 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016636 | IEA | InterPro | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | |
| GO:0050897 | IEA | InterPro | cobalt ion binding | |
| GO:0050619 | ISO | PLAZA Integrative Orthology | phytochromobilin:ferredoxin oxidoreductase activity | AT3G09150 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G09150 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009249 | Ferredoxin-dependent bilin reductase |
| Mapman id | Description |
|---|---|
| 7.12.5.3 | Coenzyme metabolism.tetrapyrrol biosynthesis.heme biosynthesis and modification.phytochromobilin synthase |