Gene: Carub.0003s0826

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s0826
  • Transcript Identifier Carub.0003s0826.1
  • Gene Type Coding gene
  • Location scaffold_3 : 2840620-2845326 : negative

Gene Family Information

  • ID HOM05D001476
  • #Genes/#Species 430/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s0826.v1.1
  • pacid 39239263
  • synonym Carubv10012938m.g

Descriptions

  • Description 3.2.1.162 - Lambda-carrageenase / Endo-beta-1,4-carrageenose 2,6,2'-trisulfate-hydrolase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010208
ISO
PLAZA Integrative Orthologypollen wall assembly AT3G09090
GO:0006370
ISO
PLAZA Homology (enrichment)7-methylguanosine mRNA capping HOM05D001476
GO:0016311
ISO
PLAZA Homology (enrichment)dephosphorylation HOM05D001476
GO:0010584
ISO
PLAZA Integrative Orthologypollen exine formation AT3G09090

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D001476
GO:0004484
ISO
PLAZA Homology (enrichment)mRNA guanylyltransferase activity HOM05D001476
GO:0008138
ISO
PLAZA Homology (enrichment)protein tyrosine/serine/threonine phosphatase activity HOM05D001476

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT3G09090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013517 FG-GAP repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
21.8.3.1 Cell wall organisation.sporopollenin.exine wall formation.exine patterning factor (DEX1)