Gene: Carub.0002s2647
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0002s2647
- Transcript Identifier Carub.0002s2647.1
- Gene Type Coding gene
- Location scaffold_2 : 13634442-13635655 : positive
Gene Family Information
- ID HOM05D002614
- #Genes/#Species 262/99
- Phylogenetic origin
- ID ORTHO05D002794
- #Genes/#Species 261/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0002s2647.v1.1
- pacid 39245205
- synonym Carubv10020885m.g
Descriptions
- Description K08503 - syntaxin of plants SYP5 (SYP5)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016192 | ISO | PLAZA Integrative Orthology | vesicle-mediated transport | AT1G79590 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005484 | ISO | PLAZA Integrative Orthology | SNAP receptor activity | AT1G79590 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010008 | ISO | PLAZA Integrative Orthology | endosome membrane | AT1G79590 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT1G79590 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000727 | Target SNARE coiled-coil homology domain |
| Mapman id | Description |
|---|---|
| 22.3.5.1.4.1 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qc-type SNARE components.SYP5-group component |