Gene: Carub.0002s0909
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0002s0909
- Transcript Identifier Carub.0002s0909.1
- Gene Type Coding gene
- Location scaffold_2 : 4647382-4655911 : positive
Gene Family Information
- ID HOM05D000200
- #Genes/#Species 1958/100
- Phylogenetic origin
- ID ORTHO05D000262
- #Genes/#Species 1247/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0002s0909.v1.1
- pacid 39244781
- synonym Carubv10019655m.g
Descriptions
- Description PTHR13140:SF390 - MYOSIN-11-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007015 | IEA | InterPro | actin filament organization | |
| GO:0051640 | ISO | PLAZA Integrative Orthology | organelle localization | AT1G54560 |
| GO:0009860 | ISO | PLAZA Integrative Orthology | pollen tube growth | AT1G54560 |
| GO:0030048 | ISO | PLAZA Integrative Orthology | actin filament-based movement | AT3G58160 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003774 | IEA | InterPro | motor activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000146 | ISO | PLAZA Integrative Orthology | microfilament motor activity | AT1G54560 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016459 | IEA | InterPro | myosin complex | |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G58160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR000048 | IQ motif, EF-hand binding site |
| IPR036018 | Plant myosin, class XI, motor domain |
| IPR002710 | Dilute domain |
| IPR001609 | Myosin head, motor domain |
| IPR036961 | Kinesin motor domain superfamily |
| IPR037975 | Class XI myosin, cargo binding domain |
| IPR004009 | Myosin, N-terminal, SH3-like |
| Mapman id | Description |
|---|---|
| 20.2.4.1 | Cytoskeleton organisation.microfilament network.myosin microfilament-based motor protein activities.class XI myosin |