Gene: AT1G54560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G54560
  • Transcript Identifier AT1G54560.2
  • Gene Type Coding gene
  • Location Chr1 : 20371649-20379871 : negative

Gene Family Information

  • ID HOM05D000200
  • #Genes/#Species 1958/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G54560.2
  • symbol XIE
  • uniprot F4HWY6

Descriptions

  • Description Myosin family protein with Dil domain-containing protein
  • Computational description XIE; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G08730.1); Has 72336 Blast hits to 42875 proteins in 2809 species: Archae - 1097; Bacteria - 9896; Metazoa - 36316; Fungi - 5231; Plants - 3078; Viruses - 250; Other Eukaryotes - 16468 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007015
IEA
GOA Databaseactin filament organization
GO:0007015
IGI
IBA
Gene Ontologyactin filament organization1 2
GO:0007015
IEA
InterProactin filament organization
GO:0030050
IBA
Gene Ontologyvesicle transport along actin filament1
GO:0009860
IGI
IBA
Gene Ontologypollen tube growth1 2
GO:0051640
IGI
Gene Ontologyorganelle localization2
GO:0030048
TAS
Gene Ontologyactin filament-based movement3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003774
IEA
GOA Databasemotor activity
GO:0003774
ISS
Gene Ontologymotor activity3
GO:0003774
IEA
InterPromotor activity
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003779
IEA
GOA Databaseactin binding
GO:0000146
IMP
IBA
Gene Ontologymicrofilament motor activity1 2
GO:0051015
IBA
Gene Ontologyactin filament binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031982
IBA
Gene Ontologyvesicle1
GO:0016459
IEA
GOA Databasemyosin complex
GO:0016459
ISS
Gene Ontologymyosin complex4
GO:0016459
IEA
InterPromyosin complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0015629
IBA
Gene Ontologyactin cytoskeleton1
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001609 Myosin head, motor domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000048 IQ motif, EF-hand binding site
IPR036018 Plant myosin, class XI, motor domain
IPR036961 Kinesin motor domain superfamily
IPR002710 Dilute domain
IPR037975 Class XI myosin, cargo binding domain
IPR004009 Myosin, N-terminal, SH3-like
Mapman id Description
20.2.4.1 Cytoskeleton organisation.microfilament network.myosin microfilament-based motor protein activities.class XI myosin