Gene: Carub.0002s0232
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0002s0232
- Transcript Identifier Carub.0002s0232.1
- Gene Type Coding gene
- Location scaffold_2 : 966907-970559 : negative
Gene Family Information
- ID HOM05D000486
- #Genes/#Species 1097/97
- Phylogenetic origin
- ID ORTHO05D000375
- #Genes/#Species 1037/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0002s0232.v1.1
- pacid 39243119
- synonym Carubv10019930m.g
Descriptions
- Description PTHR31953:SF17 - ACID BETA-FRUCTOFURANOSIDASE 3, VACUOLAR-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0071370 | ISO | PLAZA Integrative Orthology | cellular response to gibberellin stimulus | AT1G62660 |
| GO:0009617 | ISO | PLAZA Integrative Orthology | response to bacterium | AT1G62660 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT1G62660 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT1G62660 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT1G62660 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004564 | IEA | InterPro | beta-fructofuranosidase activity | |
| GO:0004575 | IEA | InterPro | sucrose alpha-glucosidase activity | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000325 | ISO | PLAZA Integrative Orthology | plant-type vacuole | AT1G62660 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT1G62660 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR023296 | Glycosyl hydrolase, five-bladed beta-propellor domain superfamily |
| IPR013148 | Glycosyl hydrolase family 32, N-terminal |
| IPR021792 | Beta-fructofuranosidase, N-terminal domain |
| IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| IPR001362 | Glycoside hydrolase, family 32 |
| IPR013189 | Glycosyl hydrolase family 32, C-terminal |
| Mapman id | Description |
|---|---|
| 3.1.4.1.2 | Carbohydrate metabolism.sucrose metabolism.degradation.invertase activities.acid beta-fructofuranosidase (VIN) |