Gene: Carub.0001s4329

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s4329
  • Transcript Identifier Carub.0001s4329.1
  • Gene Type Coding gene
  • Location scaffold_1 : 18993924-18995063 : positive

Gene Family Information

  • ID HOM05D000815
  • #Genes/#Species 726/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s4329.v1.1
  • pacid 39231340
  • synonym Carubv10009310m.g

Descriptions

  • Description PTHR31307//PTHR31307:SF4 - FAMILY NOT NAMED // 6B-INTERACTING PROTEIN 1-LIKE 1-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G54060
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G54060
GO:0048831
ISO
PLAZA Integrative Orthologyregulation of shoot system development AT1G54060
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT1G54060
GO:0010431
ISO
PLAZA Integrative Orthologyseed maturation AT1G54060
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G54060

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G54060
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G54060
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G54060

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G54060
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G54060

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044823 Trihelix transcription factor ASIL1/2-like
IPR044822 Myb/SANT-like DNA-binding domain 4
Mapman id Description
15.5.20 RNA biosynthesis.transcriptional regulation.transcription factor (Trihelix)